Dca46540.1
Annotation
- 4-exons
- f-1
- sp|Q9M7J0_9ROSI#Retinoblastoma-related protein 1#Populus tremula x Populus tremuloides#Name=RB1#GO:0005634;GO:0051726#0F1P1C
- Repeat List (scaffold5568)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46540.1 |
52 |
244 |
265 |
43.77 |
193 |
59 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9M7J0_9ROSI |
338 |
535 |
1035 |
19.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46540.1 |
62 |
244 |
265 |
41.13 |
183 |
60 |
3e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G12280.1 |
328 |
510 |
1013 |
18.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5568 |
Augustus |
mRNA |
29469 |
31283 |
. |
- |
. |
ID=Dca46540.1;Parent=Dca46540 |
| scaffold5568 |
Augustus |
exon |
29469 |
29966 |
. |
- |
. |
ID=Dca46540.1.exon1;Parent=Dca46540.1 |
| scaffold5568 |
Augustus |
exon |
30460 |
30566 |
. |
- |
. |
ID=Dca46540.1.exon2;Parent=Dca46540.1 |
| scaffold5568 |
Augustus |
exon |
30942 |
31044 |
. |
- |
. |
ID=Dca46540.1.exon3;Parent=Dca46540.1 |
| scaffold5568 |
Augustus |
exon |
31194 |
31283 |
. |
- |
. |
ID=Dca46540.1.exon4;Parent=Dca46540.1 |
