Dca46567.1
Annotation
- 4-exons
- f-1
- sp|A5BSJ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008285#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5576)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46567.1 |
286 |
382 |
1127 |
4.43 |
97 |
52 |
4e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BSJ3_VITVI |
631 |
726 |
2237 |
4.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46567.1 |
1006 |
1115 |
1127 |
3.1 |
110 |
32 |
5e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
6 |
114 |
591 |
18.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5576 |
Augustus |
mRNA |
3635 |
7573 |
. |
- |
. |
ID=Dca46567.1;Parent=Dca46567 |
| scaffold5576 |
Augustus |
exon |
3635 |
3666 |
. |
- |
. |
ID=Dca46567.1.exon1;Parent=Dca46567.1 |
| scaffold5576 |
Augustus |
exon |
4017 |
6228 |
. |
- |
. |
ID=Dca46567.1.exon2;Parent=Dca46567.1 |
| scaffold5576 |
Augustus |
exon |
6333 |
6913 |
. |
- |
. |
ID=Dca46567.1.exon3;Parent=Dca46567.1 |
| scaffold5576 |
Augustus |
exon |
7015 |
7573 |
. |
- |
. |
ID=Dca46567.1.exon4;Parent=Dca46567.1 |
