Carnation DB

Dca46591.1

Annotation

5-exons
f-1
sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
Repeat List (scaffold5583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46591.1	3	82	666	4.05	80	34	3e-08
Target_name	Start	End	Length	Cov(%)
sp\|A5AUE6_VITVI	54	132	2026	3.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46591.1	115	666	666	28.37	552	31	2e-69
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	592	1157	1401	40.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5583	Augustus	mRNA	22016	26227	.	-	.	ID=Dca46591.1;Parent=Dca46591
scaffold5583	Augustus	exon	22016	23033	.	-	.	ID=Dca46591.1.exon1;Parent=Dca46591.1
scaffold5583	Augustus	exon	24026	24189	.	-	.	ID=Dca46591.1.exon2;Parent=Dca46591.1
scaffold5583	Augustus	exon	24479	24735	.	-	.	ID=Dca46591.1.exon3;Parent=Dca46591.1
scaffold5583	Augustus	exon	24899	25147	.	-	.	ID=Dca46591.1.exon4;Parent=Dca46591.1
scaffold5583	Augustus	exon	25915	26227	.	-	.	ID=Dca46591.1.exon5;Parent=Dca46591.1