Carnation DB

Dca46642.1

Annotation

7-exons
f-1
sp|A5B6A5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041904#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold5596)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46642.1	443	1346	1348	29.82	904	42	0
Target_name	Start	End	Length	Cov(%)
sp\|A5B6A5_VITVI	78	1022	1633	57.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46642.1	988	1317	1348	7.56	330	31	1e-46
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	6	334	591	55.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5596	Augustus	mRNA	4187	11143	.	-	.	ID=Dca46642.1;Parent=Dca46642
scaffold5596	Augustus	exon	4187	5814	.	-	.	ID=Dca46642.1.exon1;Parent=Dca46642.1
scaffold5596	Augustus	exon	6007	6249	.	-	.	ID=Dca46642.1.exon2;Parent=Dca46642.1
scaffold5596	Augustus	exon	6392	7390	.	-	.	ID=Dca46642.1.exon3;Parent=Dca46642.1
scaffold5596	Augustus	exon	7546	7820	.	-	.	ID=Dca46642.1.exon4;Parent=Dca46642.1
scaffold5596	Augustus	exon	9581	9695	.	-	.	ID=Dca46642.1.exon5;Parent=Dca46642.1
scaffold5596	Augustus	exon	10123	10755	.	-	.	ID=Dca46642.1.exon6;Parent=Dca46642.1
scaffold5596	Augustus	exon	10990	11143	.	-	.	ID=Dca46642.1.exon7;Parent=Dca46642.1