Carnation DB

Dca46658.1

Annotation

13-exons
f-1
sp|B9IB91_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573323#GO:0005634;GO:0003697;GO:0000724;GO:0007090#1F2P1C
AT5G01630.1 | Symbols: BRCA2B, BRCA2(V), ATBRCA2(V) | BRCA2-like B | chr5:235117-240911 REVERSE LENGTH=1155
Repeat List (scaffold56)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46658.1	5	608	616	56.65	604	57	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IB91_POPTR	571	1170	1186	50.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46658.1	5	603	616	52.43	599	54	0
Target_name	Start	End	Length	Cov(%)
AT5G01630.1	539	1128	1155	51.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold56	Augustus	mRNA	71772	76280	.	-	.	ID=Dca46658.1;Parent=Dca46658
scaffold56	Augustus	exon	71772	71966	.	-	.	ID=Dca46658.1.exon1;Parent=Dca46658.1
scaffold56	Augustus	exon	72839	73049	.	-	.	ID=Dca46658.1.exon2;Parent=Dca46658.1
scaffold56	Augustus	exon	73148	73210	.	-	.	ID=Dca46658.1.exon3;Parent=Dca46658.1
scaffold56	Augustus	exon	73291	73433	.	-	.	ID=Dca46658.1.exon4;Parent=Dca46658.1
scaffold56	Augustus	exon	73554	73736	.	-	.	ID=Dca46658.1.exon5;Parent=Dca46658.1
scaffold56	Augustus	exon	73818	74016	.	-	.	ID=Dca46658.1.exon6;Parent=Dca46658.1
scaffold56	Augustus	exon	74193	74264	.	-	.	ID=Dca46658.1.exon7;Parent=Dca46658.1
scaffold56	Augustus	exon	74374	74485	.	-	.	ID=Dca46658.1.exon8;Parent=Dca46658.1
scaffold56	Augustus	exon	74569	74644	.	-	.	ID=Dca46658.1.exon9;Parent=Dca46658.1
scaffold56	Augustus	exon	74756	74806	.	-	.	ID=Dca46658.1.exon10;Parent=Dca46658.1
scaffold56	Augustus	exon	74900	75164	.	-	.	ID=Dca46658.1.exon11;Parent=Dca46658.1
scaffold56	Augustus	exon	75286	75436	.	-	.	ID=Dca46658.1.exon12;Parent=Dca46658.1
scaffold56	Augustus	exon	76151	76280	.	-	.	ID=Dca46658.1.exon13;Parent=Dca46658.1