Dca46659.1
Annotation
- 3-exons
- f-1
- sp|B9IB91_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573323#GO:0005634;GO:0003697;GO:0000724;GO:0007090#1F2P1C
- sp|B9SL09_RICCO#Breast cancer type 2 susceptibility protein brca2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0847980#GO:0005634;GO:0003697;GO:0000724;GO:0007090#1F2P1C
- Repeat List (scaffold56)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46659.1 |
1 |
466 |
469 |
40.51 |
466 |
36 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IB91_POPTR |
1 |
515 |
1186 |
43.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46659.1 |
1 |
466 |
469 |
35.6 |
466 |
33 |
3e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G01630.1 |
1 |
483 |
1155 |
41.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold56 |
Augustus |
mRNA |
76584 |
78623 |
. |
- |
. |
ID=Dca46659.1;Parent=Dca46659 |
| scaffold56 |
Augustus |
exon |
76584 |
77671 |
. |
- |
. |
ID=Dca46659.1.exon1;Parent=Dca46659.1 |
| scaffold56 |
Augustus |
exon |
78212 |
78385 |
. |
- |
. |
ID=Dca46659.1.exon2;Parent=Dca46659.1 |
| scaffold56 |
Augustus |
exon |
78476 |
78623 |
. |
- |
. |
ID=Dca46659.1.exon3;Parent=Dca46659.1 |
