Carnation DB

Dca46667.1

Annotation

8-exons
f-1
sp|F6H6T1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0105g00280#unknown#0F0P0C
AT5G06360.1 | Symbols: | Ribosomal protein S8e family protein | chr5:1944835-1946512 FORWARD LENGTH=260
Repeat List (scaffold56)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46667.1	1	259	259	86.87	259	87	6e-131
Target_name	Start	End	Length	Cov(%)
sp\|F6H6T1_VITVI	2	260	260	99.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46667.1	1	259	259	84.55	259	85	3e-131
Target_name	Start	End	Length	Cov(%)
AT5G06360.1	2	260	260	99.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold56	Augustus	mRNA	136898	139441	.	+	.	ID=Dca46667.1;Parent=Dca46667
scaffold56	Augustus	exon	136898	137017	.	+	.	ID=Dca46667.1.exon1;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	137130	137197	.	+	.	ID=Dca46667.1.exon2;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	137997	138105	.	+	.	ID=Dca46667.1.exon3;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	138490	138558	.	+	.	ID=Dca46667.1.exon4;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	138651	138708	.	+	.	ID=Dca46667.1.exon5;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	138862	139097	.	+	.	ID=Dca46667.1.exon6;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	139238	139289	.	+	.	ID=Dca46667.1.exon7;Parent=Dca46667.1
scaffold56	Augus-PASA	exon	139374	139441	.	+	.	ID=Dca46667.1.exon8;Parent=Dca46667.1