Dca46752.1
Annotation
- 3-exons
- f-1
- sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold561)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46752.1 |
29 |
1367 |
1385 |
42.02 |
1339 |
43 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AFE2_VITVI |
16 |
1261 |
1269 |
98.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46752.1 |
339 |
1355 |
1385 |
23.03 |
1017 |
30 |
1e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1389 |
1401 |
72.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold561 |
Augustus |
mRNA |
33477 |
37870 |
. |
+ |
. |
ID=Dca46752.1;Parent=Dca46752 |
| scaffold561 |
Augustus |
exon |
33477 |
35734 |
. |
+ |
. |
ID=Dca46752.1.exon1;Parent=Dca46752.1 |
| scaffold561 |
Augustus |
exon |
35890 |
37201 |
. |
+ |
. |
ID=Dca46752.1.exon2;Parent=Dca46752.1 |
| scaffold561 |
Augustus |
exon |
37283 |
37870 |
. |
+ |
. |
ID=Dca46752.1.exon3;Parent=Dca46752.1 |
