Dca46855.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5636)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46855.1 |
20 |
858 |
858 |
51.63 |
839 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
9 |
876 |
1501 |
57.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46855.1 |
352 |
855 |
858 |
23.54 |
504 |
40 |
2e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
562 |
707 |
71.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5636 |
Augustus |
mRNA |
332 |
3061 |
. |
- |
. |
ID=Dca46855.1;Parent=Dca46855 |
| scaffold5636 |
Augustus |
exon |
332 |
2327 |
. |
- |
. |
ID=Dca46855.1.exon1;Parent=Dca46855.1 |
| scaffold5636 |
Augustus |
exon |
2416 |
2588 |
. |
- |
. |
ID=Dca46855.1.exon2;Parent=Dca46855.1 |
| scaffold5636 |
Augustus |
exon |
2657 |
3061 |
. |
- |
. |
ID=Dca46855.1.exon3;Parent=Dca46855.1 |
