Carnation DB

Dca46872.1

Annotation

8-exons
f-1
sp|F6GTM2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g09980#GO:0003676;GO:0008270#2F0P0C
Os12t0279100-01 Transcription factor jumonji domain containing protein.
Repeat List (scaffold564)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46872.1	1123	1341	1449	6.83	219	43	8e-35
Target_name	Start	End	Length	Cov(%)
sp\|F6GTM2_VITVI	982	1189	1246	16.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46872.1	11	1341	1449	43.82	1331	45	0
Target_name	Start	End	Length	Cov(%)
AT3G48430.1	4	1302	1360	95.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold564	Augustus	mRNA	34104	41977	.	+	.	ID=Dca46872.1;Parent=Dca46872
scaffold564	Augustus	exon	34104	34998	.	+	.	ID=Dca46872.1.exon1;Parent=Dca46872.1
scaffold564	Augustus	exon	36592	36670	.	+	.	ID=Dca46872.1.exon2;Parent=Dca46872.1
scaffold564	Augustus	exon	36880	36947	.	+	.	ID=Dca46872.1.exon3;Parent=Dca46872.1
scaffold564	Augustus	exon	37033	37177	.	+	.	ID=Dca46872.1.exon4;Parent=Dca46872.1
scaffold564	Augustus	exon	37542	38143	.	+	.	ID=Dca46872.1.exon5;Parent=Dca46872.1
scaffold564	Augustus	exon	38492	39139	.	+	.	ID=Dca46872.1.exon6;Parent=Dca46872.1
scaffold564	Augustus	exon	39438	41024	.	+	.	ID=Dca46872.1.exon7;Parent=Dca46872.1
scaffold564	Augustus	exon	41652	41977	.	+	.	ID=Dca46872.1.exon8;Parent=Dca46872.1