Carnation DB

Dca46873.1

Annotation

6-exons
f-1
sp|D7SHC4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g09990#GO:0003676;GO:0008270#2F0P0C
sp|G8A2H7_MEDTR#Zinc finger CCCH domain-containing protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_135s0022#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold564)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46873.1	337	428	440	9.09	92	44	2e-17
Target_name	Start	End	Length	Cov(%)
sp\|D7SHC4_VITVI	175	266	484	19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46873.1	106	203	440	7.72	98	34	2e-06
Target_name	Start	End	Length	Cov(%)
AT3G48440.1	343	426	448	18.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold564	Augus-PASA	mRNA	42709	47390	.	+	.	ID=Dca46873.1;Parent=Dca46873
scaffold564	Augus-PASA	exon	42709	43134	.	+	.	ID=Dca46873.1.exon1;Parent=Dca46873.1
scaffold564	Augus-PASA	exon	43977	44078	.	+	.	ID=Dca46873.1.exon2;Parent=Dca46873.1
scaffold564	Augus-PASA	exon	44897	45007	.	+	.	ID=Dca46873.1.exon3;Parent=Dca46873.1
scaffold564	Augus-PASA	exon	45230	45505	.	+	.	ID=Dca46873.1.exon4;Parent=Dca46873.1
scaffold564	Augus-PASA	exon	46161	46406	.	+	.	ID=Dca46873.1.exon5;Parent=Dca46873.1
scaffold564	Augus-PASA	exon	47229	47390	.	+	.	ID=Dca46873.1.exon6;Parent=Dca46873.1