Carnation DB

Dca46876.1

Annotation

5-exons
f-1
sp|B9RAN4_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507440#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold564)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46876.1	324	495	495	22.22	172	64	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9RAN4_RICCO	83	253	253	67.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46876.1	324	493	495	20.2	170	59	1e-55
Target_name	Start	End	Length	Cov(%)
AT1G13195.1	87	256	260	65.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold564	Augustus	mRNA	76926	80669	.	-	.	ID=Dca46876.1;Parent=Dca46876
scaffold564	Augustus	exon	76926	77139	.	-	.	ID=Dca46876.1.exon1;Parent=Dca46876.1
scaffold564	Augustus	exon	77399	77633	.	-	.	ID=Dca46876.1.exon2;Parent=Dca46876.1
scaffold564	Augustus	exon	77979	78045	.	-	.	ID=Dca46876.1.exon3;Parent=Dca46876.1
scaffold564	Augustus	exon	79585	80058	.	-	.	ID=Dca46876.1.exon4;Parent=Dca46876.1
scaffold564	Augustus	exon	80172	80669	.	-	.	ID=Dca46876.1.exon5;Parent=Dca46876.1