Carnation DB

Dca46926.1

Annotation

12-exons
f-1
sp|B9HNV8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1087966#GO:0005634;GO:0000808;GO:0005524;GO:0017111;GO:0008270;GO:0006260#3F1P2C
AT4G12620.1 | Symbols: ORC1B, ATORC1B, UNE13 | origin of replication complex 1B | chr4:7459812-7462253 REVERSE LENGTH=813
Repeat List (scaffold5650)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46926.1	19	845	845	65.56	827	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HNV8_POPTR	17	814	814	98.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46926.1	156	845	845	57.63	690	71	0
Target_name	Start	End	Length	Cov(%)
AT4G12620.1	129	813	813	84.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5650	Augustus	mRNA	10335	14429	.	-	.	ID=Dca46926.1;Parent=Dca46926
scaffold5650	Augustus	exon	10335	10398	.	-	.	ID=Dca46926.1.exon1;Parent=Dca46926.1
scaffold5650	Augustus	exon	10517	10600	.	-	.	ID=Dca46926.1.exon2;Parent=Dca46926.1
scaffold5650	Augustus	exon	10715	11231	.	-	.	ID=Dca46926.1.exon3;Parent=Dca46926.1
scaffold5650	Augustus	exon	11339	11396	.	-	.	ID=Dca46926.1.exon4;Parent=Dca46926.1
scaffold5650	Augustus	exon	11492	11653	.	-	.	ID=Dca46926.1.exon5;Parent=Dca46926.1
scaffold5650	Augustus	exon	11743	11865	.	-	.	ID=Dca46926.1.exon6;Parent=Dca46926.1
scaffold5650	Augustus	exon	11959	12058	.	-	.	ID=Dca46926.1.exon7;Parent=Dca46926.1
scaffold5650	Augustus	exon	12135	12286	.	-	.	ID=Dca46926.1.exon8;Parent=Dca46926.1
scaffold5650	Augustus	exon	12372	12527	.	-	.	ID=Dca46926.1.exon9;Parent=Dca46926.1
scaffold5650	Augustus	exon	12606	12755	.	-	.	ID=Dca46926.1.exon10;Parent=Dca46926.1
scaffold5650	Augustus	exon	12984	13119	.	-	.	ID=Dca46926.1.exon11;Parent=Dca46926.1
scaffold5650	Augustus	exon	13594	14429	.	-	.	ID=Dca46926.1.exon12;Parent=Dca46926.1