Dca46930.1
Annotation
- 4-exons
- f-1
- sp|A5AVN9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_039744#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold5651)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46930.1 |
142 |
281 |
285 |
34.38 |
140 |
70 |
3e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AVN9_VITVI |
908 |
1048 |
1136 |
12.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46930.1 |
143 |
281 |
285 |
20 |
139 |
41 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1171 |
1310 |
1401 |
9.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5651 |
Augustus |
mRNA |
1360 |
3310 |
. |
- |
. |
ID=Dca46930.1;Parent=Dca46930 |
| scaffold5651 |
Augustus |
exon |
1360 |
1800 |
. |
- |
. |
ID=Dca46930.1.exon1;Parent=Dca46930.1 |
| scaffold5651 |
Augustus |
exon |
2595 |
2773 |
. |
- |
. |
ID=Dca46930.1.exon2;Parent=Dca46930.1 |
| scaffold5651 |
Augustus |
exon |
2891 |
2934 |
. |
- |
. |
ID=Dca46930.1.exon3;Parent=Dca46930.1 |
| scaffold5651 |
Augustus |
exon |
3117 |
3310 |
. |
- |
. |
ID=Dca46930.1.exon4;Parent=Dca46930.1 |
