Carnation DB

Dca46948.1

Annotation

7-exons
f-1
sp|D7TS58_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0051g00350#GO:0008270#1F0P0C
AT3G24010.1 | Symbols: ING1, ATING1 | RING/FYVE/PHD zinc finger superfamily protein | chr3:8676120-8678186 REVERSE LENGTH=234
Repeat List (scaffold5657)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46948.1	10	241	241	69.7	232	73	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|D7TS58_VITVI	5	235	235	98.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46948.1	3	241	241	65.97	239	67	1e-81
Target_name	Start	End	Length	Cov(%)
AT3G24010.1	2	234	234	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5657	Augus-PASA	mRNA	11327	14823	.	+	.	ID=Dca46948.1;Parent=Dca46948
scaffold5657	Augus-PASA	exon	11327	11357	.	+	.	ID=Dca46948.1.exon1;Parent=Dca46948.1
scaffold5657	Augus-PASA	exon	12960	13031	.	+	.	ID=Dca46948.1.exon2;Parent=Dca46948.1
scaffold5657	Augus-PASA	exon	13163	13350	.	+	.	ID=Dca46948.1.exon3;Parent=Dca46948.1
scaffold5657	Augus-PASA	exon	13674	13737	.	+	.	ID=Dca46948.1.exon4;Parent=Dca46948.1
scaffold5657	Augus-PASA	exon	13826	13925	.	+	.	ID=Dca46948.1.exon5;Parent=Dca46948.1
scaffold5657	Augus-PASA	exon	14467	14626	.	+	.	ID=Dca46948.1.exon6;Parent=Dca46948.1
scaffold5657	Augus-PASA	exon	14713	14823	.	+	.	ID=Dca46948.1.exon7;Parent=Dca46948.1