Dca46980.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5664)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46980.1 |
1 |
206 |
212 |
59.9 |
206 |
50 |
5e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
893 |
896 |
28.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46980.1 |
10 |
191 |
212 |
32.07 |
182 |
30 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1156 |
1378 |
1401 |
15.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5664 |
Augustus |
mRNA |
13914 |
14704 |
. |
- |
. |
ID=Dca46980.1;Parent=Dca46980 |
| scaffold5664 |
Augustus |
exon |
13914 |
14307 |
. |
- |
. |
ID=Dca46980.1.exon1;Parent=Dca46980.1 |
| scaffold5664 |
Augustus |
exon |
14460 |
14704 |
. |
- |
. |
ID=Dca46980.1.exon2;Parent=Dca46980.1 |
