Dca47047.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold568)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47047.1 |
1 |
441 |
443 |
79.45 |
441 |
71 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
810 |
1306 |
1307 |
38.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47047.1 |
1 |
439 |
443 |
39.5 |
439 |
36 |
2e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
931 |
1419 |
1428 |
34.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold568 |
Augustus |
mRNA |
103930 |
105429 |
. |
- |
. |
ID=Dca47047.1;Parent=Dca47047 |
| scaffold568 |
Augustus |
exon |
103930 |
104885 |
. |
- |
. |
ID=Dca47047.1.exon1;Parent=Dca47047.1 |
| scaffold568 |
Augustus |
exon |
105054 |
105429 |
. |
- |
. |
ID=Dca47047.1.exon2;Parent=Dca47047.1 |
