Carnation DB

Dca4708.1

Annotation

8-exons
f-1
sp|D7SHA5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g10250#unknown#0F0P0C
AT4G24820.1 | Symbols: | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain | chr4:12790471-12792599 REVERSE LENGTH=387
Repeat List (scaffold1178)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4708.1	1	386	386	86.52	386	87	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SHA5_VITVI	1	386	386	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4708.1	5	386	386	82.12	382	83	0
Target_name	Start	End	Length	Cov(%)
AT4G24820.1	6	387	387	98.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1178	Augus-PASA	mRNA	30473	34476	.	+	.	ID=Dca4708.1;Parent=Dca4708
scaffold1178	Augus-PASA	exon	30473	30608	.	+	.	ID=Dca4708.1.exon1;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	30754	30868	.	+	.	ID=Dca4708.1.exon2;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	32462	32552	.	+	.	ID=Dca4708.1.exon3;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	32653	32798	.	+	.	ID=Dca4708.1.exon4;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	32909	33128	.	+	.	ID=Dca4708.1.exon5;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	33220	33328	.	+	.	ID=Dca4708.1.exon6;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	33729	33897	.	+	.	ID=Dca4708.1.exon7;Parent=Dca4708.1
scaffold1178	Augus-PASA	exon	34302	34476	.	+	.	ID=Dca4708.1.exon8;Parent=Dca4708.1