Carnation DB

Dca47126.1

Annotation

22-exons
f-1
sp|F6I0Z0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g02620#GO:0005634;GO:0000166;GO:0003723;GO:0006397#2F1P1C
AT2G16940.2 | Symbols: | Splicing factor, CC1-like | chr2:7342869-7347052 REVERSE LENGTH=610
Repeat List (scaffold57)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47126.1	604	943	944	26.27	340	69	4e-133
Target_name	Start	End	Length	Cov(%)
sp\|F6I0Z0_VITVI	265	628	629	57.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47126.1	604	943	944	23.62	340	64	5e-111
Target_name	Start	End	Length	Cov(%)
AT2G16940.2	257	607	610	57.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold57	Augustus	mRNA	74245	82805	.	-	.	ID=Dca47126.1;Parent=Dca47126
scaffold57	Augustus	exon	74245	74286	.	-	.	ID=Dca47126.1.exon1;Parent=Dca47126.1
scaffold57	Augustus	exon	74382	74496	.	-	.	ID=Dca47126.1.exon2;Parent=Dca47126.1
scaffold57	Augustus	exon	74728	74816	.	-	.	ID=Dca47126.1.exon3;Parent=Dca47126.1
scaffold57	Augustus	exon	74904	75093	.	-	.	ID=Dca47126.1.exon4;Parent=Dca47126.1
scaffold57	Augustus	exon	75298	75362	.	-	.	ID=Dca47126.1.exon5;Parent=Dca47126.1
scaffold57	Augustus	exon	75645	75728	.	-	.	ID=Dca47126.1.exon6;Parent=Dca47126.1
scaffold57	Augustus	exon	75800	75874	.	-	.	ID=Dca47126.1.exon7;Parent=Dca47126.1
scaffold57	Augustus	exon	76328	76411	.	-	.	ID=Dca47126.1.exon8;Parent=Dca47126.1
scaffold57	Augustus	exon	76675	76900	.	-	.	ID=Dca47126.1.exon9;Parent=Dca47126.1
scaffold57	Augustus	exon	77015	77070	.	-	.	ID=Dca47126.1.exon10;Parent=Dca47126.1
scaffold57	Augustus	exon	77453	77567	.	-	.	ID=Dca47126.1.exon11;Parent=Dca47126.1
scaffold57	Augustus	exon	77806	77894	.	-	.	ID=Dca47126.1.exon12;Parent=Dca47126.1
scaffold57	Augustus	exon	77975	78164	.	-	.	ID=Dca47126.1.exon13;Parent=Dca47126.1
scaffold57	Augustus	exon	78369	78433	.	-	.	ID=Dca47126.1.exon14;Parent=Dca47126.1
scaffold57	Augustus	exon	78716	78799	.	-	.	ID=Dca47126.1.exon15;Parent=Dca47126.1
scaffold57	Augustus	exon	78871	78945	.	-	.	ID=Dca47126.1.exon16;Parent=Dca47126.1
scaffold57	Augustus	exon	79399	79482	.	-	.	ID=Dca47126.1.exon17;Parent=Dca47126.1
scaffold57	Augustus	exon	79740	79965	.	-	.	ID=Dca47126.1.exon18;Parent=Dca47126.1
scaffold57	Augustus	exon	80072	80127	.	-	.	ID=Dca47126.1.exon19;Parent=Dca47126.1
scaffold57	Augustus	exon	80439	80495	.	-	.	ID=Dca47126.1.exon20;Parent=Dca47126.1
scaffold57	Augustus	exon	80651	80732	.	-	.	ID=Dca47126.1.exon21;Parent=Dca47126.1
scaffold57	Augustus	exon	82120	82805	.	-	.	ID=Dca47126.1.exon22;Parent=Dca47126.1