Carnation DB

Dca47154.1

Annotation

6-exons
f-1
sp|B9HPZ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832929#unknown#0F0P0C
sp|B9SII7_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1419520#unknown#0F0P0C
Repeat List (scaffold57)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47154.1	9	229	230	66.95	221	70	4e-87
Target_name	Start	End	Length	Cov(%)
sp\|B9HPZ3_POPTR	7	226	227	96.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47154.1	11	230	230	61.3	220	65	1e-83
Target_name	Start	End	Length	Cov(%)
AT4G38370.1	10	225	225	96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold57	Augus-PASA	mRNA	289336	292083	.	+	.	ID=Dca47154.1;Parent=Dca47154
scaffold57	Augus-PASA	exon	289336	289434	.	+	.	ID=Dca47154.1.exon1;Parent=Dca47154.1
scaffold57	Augus-PASA	exon	290004	290084	.	+	.	ID=Dca47154.1.exon2;Parent=Dca47154.1
scaffold57	Augus-PASA	exon	290592	290720	.	+	.	ID=Dca47154.1.exon3;Parent=Dca47154.1
scaffold57	Augus-PASA	exon	291370	291432	.	+	.	ID=Dca47154.1.exon4;Parent=Dca47154.1
scaffold57	Augus-PASA	exon	291675	291802	.	+	.	ID=Dca47154.1.exon5;Parent=Dca47154.1
scaffold57	Augus-PASA	exon	291891	292083	.	+	.	ID=Dca47154.1.exon6;Parent=Dca47154.1