Dca47155.1
Annotation
- 2-exons
- f-1
- sp|D7M248_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487770#unknown#0F0P0C
- AT5G09530.1 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr5:2960080-2961192 REVERSE LENGTH=370
- Repeat List (scaffold57)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47155.1 |
21 |
191 |
314 |
27.7 |
171 |
51 |
3e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7M248_ARALL |
179 |
332 |
335 |
45.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47155.1 |
189 |
314 |
314 |
21.33 |
126 |
52 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G09530.1 |
39 |
148 |
370 |
29.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold57 |
Augustus |
mRNA |
296452 |
297827 |
. |
+ |
. |
ID=Dca47155.1;Parent=Dca47155 |
| scaffold57 |
Augustus |
exon |
296452 |
296486 |
. |
+ |
. |
ID=Dca47155.1.exon1;Parent=Dca47155.1 |
| scaffold57 |
Augustus |
exon |
296918 |
297827 |
. |
+ |
. |
ID=Dca47155.1.exon2;Parent=Dca47155.1 |
