Dca4717.1
Annotation
- 3-exons
- f-1
- sp|A5BA39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041694#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold11780)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4717.1 |
1 |
225 |
225 |
54.22 |
225 |
55 |
3e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BA39_VITVI |
905 |
1099 |
1099 |
17.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4717.1 |
1 |
215 |
225 |
32.44 |
215 |
34 |
1e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1205 |
1389 |
1401 |
13.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11780 |
Augustus |
mRNA |
3514 |
5940 |
. |
- |
. |
ID=Dca4717.1;Parent=Dca4717 |
| scaffold11780 |
Augustus |
exon |
3514 |
3742 |
. |
- |
. |
ID=Dca4717.1.exon1;Parent=Dca4717.1 |
| scaffold11780 |
Augustus |
exon |
5258 |
5471 |
. |
- |
. |
ID=Dca4717.1.exon2;Parent=Dca4717.1 |
| scaffold11780 |
Augustus |
exon |
5706 |
5940 |
. |
- |
. |
ID=Dca4717.1.exon3;Parent=Dca4717.1 |
