Carnation DB

Dca47184.1

Annotation

8-exons
f-1
sp|Q75QK2_SILLA#SEPALLATA3 homologous protein#Silene latifolia (White campion) (Bladder campion)#Name=SlSEP3#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold5706)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47184.1	1	243	244	88.52	243	89	1e-124
Target_name	Start	End	Length	Cov(%)
sp\|Q75QK2_SILLA	1	241	244	98.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47184.1	1	243	244	74.18	243	74	5e-93
Target_name	Start	End	Length	Cov(%)
AT1G24260.2	1	244	251	97.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5706	Augustus	mRNA	36697	40539	.	+	.	ID=Dca47184.1;Parent=Dca47184
scaffold5706	Augustus	exon	36697	36881	.	+	.	ID=Dca47184.1.exon1;Parent=Dca47184.1
scaffold5706	Augustus	exon	38748	38829	.	+	.	ID=Dca47184.1.exon2;Parent=Dca47184.1
scaffold5706	Augustus	exon	39247	39314	.	+	.	ID=Dca47184.1.exon3;Parent=Dca47184.1
scaffold5706	Augustus	exon	39441	39540	.	+	.	ID=Dca47184.1.exon4;Parent=Dca47184.1
scaffold5706	Augustus	exon	39638	39679	.	+	.	ID=Dca47184.1.exon5;Parent=Dca47184.1
scaffold5706	Augustus	exon	39815	39856	.	+	.	ID=Dca47184.1.exon6;Parent=Dca47184.1
scaffold5706	Augustus	exon	40206	40345	.	+	.	ID=Dca47184.1.exon7;Parent=Dca47184.1
scaffold5706	Augustus	exon	40464	40539	.	+	.	ID=Dca47184.1.exon8;Parent=Dca47184.1