Dca47216.1
Annotation
- 4-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold5714)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47216.1 |
64 |
490 |
490 |
41.02 |
427 |
43 |
5e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
271 |
739 |
764 |
61.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47216.1 |
353 |
484 |
490 |
8.16 |
132 |
31 |
1e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
124 |
255 |
591 |
22.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5714 |
Augustus |
mRNA |
202 |
2039 |
. |
- |
. |
ID=Dca47216.1;Parent=Dca47216 |
| scaffold5714 |
Augustus |
exon |
202 |
681 |
. |
- |
. |
ID=Dca47216.1.exon1;Parent=Dca47216.1 |
| scaffold5714 |
Augustus |
exon |
781 |
866 |
. |
- |
. |
ID=Dca47216.1.exon2;Parent=Dca47216.1 |
| scaffold5714 |
Augustus |
exon |
1062 |
1126 |
. |
- |
. |
ID=Dca47216.1.exon3;Parent=Dca47216.1 |
| scaffold5714 |
Augustus |
exon |
1199 |
2039 |
. |
- |
. |
ID=Dca47216.1.exon4;Parent=Dca47216.1 |
