Carnation DB

Dca47302.1

Annotation

11-exons
f-1
sp|F6GV27_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04460#GO:0016021;GO:0051205#0F1P1C
sp|B9GJQ3_POPTR#Inner membrane protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_706185#GO:0016021;GO:0051205#0F1P1C
Repeat List (scaffold574)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47302.1	1	422	434	73.73	422	72	1e-167
Target_name	Start	End	Length	Cov(%)
sp\|F6GV27_VITVI	1	443	455	97.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47302.1	12	381	434	67.28	370	76	1e-157
Target_name	Start	End	Length	Cov(%)
AT2G28800.1	34	410	462	81.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold574	Augus-PASA	mRNA	8677	13519	.	-	.	ID=Dca47302.1;Parent=Dca47302
scaffold574	Augus-PASA	exon	8677	8778	.	-	.	ID=Dca47302.1.exon1;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	8879	9002	.	-	.	ID=Dca47302.1.exon2;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	9099	9233	.	-	.	ID=Dca47302.1.exon3;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	9588	9688	.	-	.	ID=Dca47302.1.exon4;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	9779	9886	.	-	.	ID=Dca47302.1.exon5;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	10648	10752	.	-	.	ID=Dca47302.1.exon6;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	10851	10924	.	-	.	ID=Dca47302.1.exon7;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	11200	11260	.	-	.	ID=Dca47302.1.exon8;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	11665	11739	.	-	.	ID=Dca47302.1.exon9;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	12203	12313	.	-	.	ID=Dca47302.1.exon10;Parent=Dca47302.1
scaffold574	Augus-PASA	exon	13211	13519	.	-	.	ID=Dca47302.1.exon11;Parent=Dca47302.1