Dca47307.1
Annotation
- 2-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold574)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47307.1 |
9 |
579 |
623 |
34.51 |
571 |
35 |
2e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
342 |
957 |
1110 |
55.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47307.1 |
3 |
493 |
623 |
25.52 |
491 |
30 |
4e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
254 |
789 |
857 |
62.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold574 |
Augustus |
mRNA |
86234 |
88248 |
. |
+ |
. |
ID=Dca47307.1;Parent=Dca47307 |
| scaffold574 |
Augustus |
exon |
86234 |
87078 |
. |
+ |
. |
ID=Dca47307.1.exon1;Parent=Dca47307.1 |
| scaffold574 |
Augustus |
exon |
87222 |
88248 |
. |
+ |
. |
ID=Dca47307.1.exon2;Parent=Dca47307.1 |
