Carnation DB

Dca47378.1

Annotation

12-exons
f-1
sp|D7U1D5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0037g00530#GO:0016021;GO:0016760;GO:0008270;GO:0007047;GO:0030244#2F2P1C
Os09t0422500-01 Similar to Cellulose synthase (Fragment).
Repeat List (scaffold5755)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47378.1	1	1036	1036	87.06	1036	87	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U1D5_VITVI	1	1037	1037	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47378.1	1	1036	1036	85.13	1036	85	0
Target_name	Start	End	Length	Cov(%)
AT5G17420.1	1	1026	1026	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5755	Augustus	mRNA	1909	6564	.	+	.	ID=Dca47378.1;Parent=Dca47378
scaffold5755	Augustus	exon	1909	1983	.	+	.	ID=Dca47378.1.exon1;Parent=Dca47378.1
scaffold5755	Augustus	exon	2305	2500	.	+	.	ID=Dca47378.1.exon2;Parent=Dca47378.1
scaffold5755	Augustus	exon	2597	2796	.	+	.	ID=Dca47378.1.exon3;Parent=Dca47378.1
scaffold5755	Augustus	exon	2878	2968	.	+	.	ID=Dca47378.1.exon4;Parent=Dca47378.1
scaffold5755	Augustus	exon	3373	3481	.	+	.	ID=Dca47378.1.exon5;Parent=Dca47378.1
scaffold5755	Augustus	exon	3574	3840	.	+	.	ID=Dca47378.1.exon6;Parent=Dca47378.1
scaffold5755	Augustus	exon	3978	4587	.	+	.	ID=Dca47378.1.exon7;Parent=Dca47378.1
scaffold5755	Augustus	exon	4669	4881	.	+	.	ID=Dca47378.1.exon8;Parent=Dca47378.1
scaffold5755	Augustus	exon	4965	5178	.	+	.	ID=Dca47378.1.exon9;Parent=Dca47378.1
scaffold5755	Augustus	exon	5264	5460	.	+	.	ID=Dca47378.1.exon10;Parent=Dca47378.1
scaffold5755	Augustus	exon	5547	5900	.	+	.	ID=Dca47378.1.exon11;Parent=Dca47378.1
scaffold5755	Augus-PASA	exon	5980	6564	.	+	.	ID=Dca47378.1.exon12;Parent=Dca47378.1