Carnation DB

Dca47396.1

Annotation

5-exons
f-1
sp|A5BNA8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002093#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold576)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47396.1	1	598	804	36.81	598	45	4e-144
Target_name	Start	End	Length	Cov(%)
sp\|A5BNA8_VITVI	516	1084	1109	51.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47396.1	3	103	804	6.84	101	53	1e-26
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	571	674	1401	7.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold576	Augustus	mRNA	42313	46158	.	+	.	ID=Dca47396.1;Parent=Dca47396
scaffold576	Augustus	exon	42313	42620	.	+	.	ID=Dca47396.1.exon1;Parent=Dca47396.1
scaffold576	Augustus	exon	42808	43103	.	+	.	ID=Dca47396.1.exon2;Parent=Dca47396.1
scaffold576	Augustus	exon	43203	43882	.	+	.	ID=Dca47396.1.exon3;Parent=Dca47396.1
scaffold576	Augustus	exon	44101	44567	.	+	.	ID=Dca47396.1.exon4;Parent=Dca47396.1
scaffold576	Augustus	exon	45495	46158	.	+	.	ID=Dca47396.1.exon5;Parent=Dca47396.1