Dca47419.1
Annotation
- 3-exons
- f-1
- sp|F2DXL3_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0016021;GO:0004252;GO:0006508#1F1P1C
- Os09t0525900-01 Peptidase S54, rhomboid domain containing protein.
- Repeat List (scaffold5764)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47419.1 |
1 |
187 |
187 |
56.14 |
187 |
55 |
3e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F2DXL3_HORVD |
96 |
285 |
321 |
59.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47419.1 |
1 |
187 |
187 |
54.54 |
187 |
53 |
9e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0525900-01 |
98 |
287 |
324 |
58.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5764 |
Augustus |
mRNA |
4667 |
8793 |
. |
+ |
. |
ID=Dca47419.1;Parent=Dca47419 |
| scaffold5764 |
Augustus |
exon |
4667 |
4808 |
. |
+ |
. |
ID=Dca47419.1.exon1;Parent=Dca47419.1 |
| scaffold5764 |
Augustus |
exon |
5179 |
5342 |
. |
+ |
. |
ID=Dca47419.1.exon2;Parent=Dca47419.1 |
| scaffold5764 |
Augustus |
exon |
8536 |
8793 |
. |
+ |
. |
ID=Dca47419.1.exon3;Parent=Dca47419.1 |
