Carnation DB

Dca47421.1

Annotation

9-exons
f-2
sp|F6HP62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0100g00500#GO:0005634;GO:0003712#1F0P1C
AT5G62090.1 | Symbols: SLK2 | SEUSS-like 2 | chr5:24935221-24938540 REVERSE LENGTH=816
Repeat List (scaffold5764)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47421.1	1	341	368	69.56	341	73	1e-142
Target_name	Start	End	Length	Cov(%)
sp\|F6HP62_VITVI	337	689	864	40.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47421.1	1	331	368	57.88	331	63	2e-117
Target_name	Start	End	Length	Cov(%)
AT5G62090.1	334	671	816	41.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5764	Augustus	mRNA	18941	25158	.	-	.	ID=Dca47421.1;Parent=Dca47421
scaffold5764	Augustus	exon	18941	19008	.	-	.	ID=Dca47421.1.exon1;Parent=Dca47421.1
scaffold5764	Augustus	exon	22577	22960	.	-	.	ID=Dca47421.1.exon2;Parent=Dca47421.1
scaffold5764	Augustus	exon	23069	23138	.	-	.	ID=Dca47421.1.exon3;Parent=Dca47421.1
scaffold5764	Augustus	exon	23223	23316	.	-	.	ID=Dca47421.1.exon4;Parent=Dca47421.1
scaffold5764	Augustus	exon	23439	23539	.	-	.	ID=Dca47421.1.exon5;Parent=Dca47421.1
scaffold5764	Augustus	exon	23704	23772	.	-	.	ID=Dca47421.1.exon6;Parent=Dca47421.1
scaffold5764	Augustus	exon	23881	24095	.	-	.	ID=Dca47421.1.exon7;Parent=Dca47421.1
scaffold5764	Augustus	exon	24960	25008	.	-	.	ID=Dca47421.1.exon8;Parent=Dca47421.1
scaffold5764	Augustus	exon	25101	25158	.	-	.	ID=Dca47421.1.exon9;Parent=Dca47421.1