Carnation DB

Dca47435.1

Annotation

6-exons
f-1
sp|B9GVI5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_554860#GO:0005643#0F0P1C
Os03t0172000-01 Peptidase S59, nucleoporin family protein.
Repeat List (scaffold577)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47435.1	4	950	950	60.73	947	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GVI5_POPTR	93	1067	1067	91.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47435.1	5	948	950	56.94	944	56	0
Target_name	Start	End	Length	Cov(%)
AT1G80680.1	73	1041	1046	92.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold577	Augustus	mRNA	20715	26615	.	+	.	ID=Dca47435.1;Parent=Dca47435
scaffold577	Augustus	exon	20715	20724	.	+	.	ID=Dca47435.1.exon1;Parent=Dca47435.1
scaffold577	Augustus	exon	20923	23291	.	+	.	ID=Dca47435.1.exon2;Parent=Dca47435.1
scaffold577	Augustus	exon	23930	24053	.	+	.	ID=Dca47435.1.exon3;Parent=Dca47435.1
scaffold577	Augustus	exon	25845	25900	.	+	.	ID=Dca47435.1.exon4;Parent=Dca47435.1
scaffold577	Augustus	exon	26182	26279	.	+	.	ID=Dca47435.1.exon5;Parent=Dca47435.1
scaffold577	Augustus	exon	26420	26615	.	+	.	ID=Dca47435.1.exon6;Parent=Dca47435.1