Dca47470.1
Annotation
- 4-exons
- f-1
- sp|A5AZ88_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_037041#GO:0003676;GO:0015074#1F1P0C
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold578)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47470.1 |
2 |
395 |
397 |
30.22 |
394 |
30 |
2e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AZ88_VITVI |
80 |
454 |
1048 |
35.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold578 |
Augustus |
mRNA |
49884 |
51707 |
. |
+ |
. |
ID=Dca47470.1;Parent=Dca47470 |
| scaffold578 |
Augustus |
exon |
49884 |
50367 |
. |
+ |
. |
ID=Dca47470.1.exon1;Parent=Dca47470.1 |
| scaffold578 |
Augustus |
exon |
50658 |
50923 |
. |
+ |
. |
ID=Dca47470.1.exon2;Parent=Dca47470.1 |
| scaffold578 |
Augustus |
exon |
51000 |
51171 |
. |
+ |
. |
ID=Dca47470.1.exon3;Parent=Dca47470.1 |
| scaffold578 |
Augustus |
exon |
51436 |
51707 |
. |
+ |
. |
ID=Dca47470.1.exon4;Parent=Dca47470.1 |
