Carnation DB

Dca4751.1

Annotation

8-exons
f-1
sp|Q75QK2_SILLA#SEPALLATA3 homologous protein#Silene latifolia (White campion) (Bladder campion)#Name=SlSEP3#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold118)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4751.1	1	252	252	75	252	75	9e-106
Target_name	Start	End	Length	Cov(%)
sp\|Q75QK2_SILLA	1	242	244	99.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4751.1	1	252	252	67.85	252	68	9e-87
Target_name	Start	End	Length	Cov(%)
AT1G24260.2	1	245	251	97.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold118	Augus-PASA	mRNA	54327	58848	.	+	.	ID=Dca4751.1;Parent=Dca4751
scaffold118	Augus-PASA	exon	54327	54511	.	+	.	ID=Dca4751.1.exon1;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	56384	56465	.	+	.	ID=Dca4751.1.exon2;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	56891	56958	.	+	.	ID=Dca4751.1.exon3;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	57463	57562	.	+	.	ID=Dca4751.1.exon4;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	58059	58100	.	+	.	ID=Dca4751.1.exon5;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	58200	58241	.	+	.	ID=Dca4751.1.exon6;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	58473	58636	.	+	.	ID=Dca4751.1.exon7;Parent=Dca4751.1
scaffold118	Augus-PASA	exon	58773	58848	.	+	.	ID=Dca4751.1.exon8;Parent=Dca4751.1