Carnation DB

Dca47513.1

Annotation

5-exons
f-1
sp|A5BBE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_038831#GO:0016788;GO:0006629#1F1P0C
sp|B9S7Q1_RICCO#Zinc finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0610840#GO:0016788;GO:0006629#1F1P0C
Repeat List (scaffold579)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47513.1	33	369	372	74.19	337	82	2e-169
Target_name	Start	End	Length	Cov(%)
sp\|A5BBE2_VITVI	32	368	369	91.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47513.1	33	368	372	68.01	336	76	8e-158
Target_name	Start	End	Length	Cov(%)
AT5G33370.1	29	364	366	91.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold579	Augus-PASA	mRNA	47822	49586	.	+	.	ID=Dca47513.1;Parent=Dca47513
scaffold579	Augus-PASA	exon	47822	48077	.	+	.	ID=Dca47513.1.exon1;Parent=Dca47513.1
scaffold579	Augus-PASA	exon	48181	48308	.	+	.	ID=Dca47513.1.exon2;Parent=Dca47513.1
scaffold579	Augus-PASA	exon	48467	48709	.	+	.	ID=Dca47513.1.exon3;Parent=Dca47513.1
scaffold579	Augus-PASA	exon	48796	49048	.	+	.	ID=Dca47513.1.exon4;Parent=Dca47513.1
scaffold579	Augus-PASA	exon	49348	49586	.	+	.	ID=Dca47513.1.exon5;Parent=Dca47513.1