Dca47515.1
Annotation
- 2-exons
- f-1
- sp|B9N7X2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_786716#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:2354884-2356613 FORWARD LENGTH=460
- Repeat List (scaffold579)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47515.1 |
8 |
445 |
458 |
45.41 |
438 |
48 |
4e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7X2_POPTR |
16 |
444 |
450 |
95.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47515.1 |
8 |
443 |
458 |
41.04 |
436 |
43 |
9e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G07360.1 |
16 |
452 |
460 |
95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold579 |
Augustus |
mRNA |
60533 |
62342 |
. |
+ |
. |
ID=Dca47515.1;Parent=Dca47515 |
| scaffold579 |
Augustus |
exon |
60533 |
60802 |
. |
+ |
. |
ID=Dca47515.1.exon1;Parent=Dca47515.1 |
| scaffold579 |
Augustus |
exon |
61236 |
62342 |
. |
+ |
. |
ID=Dca47515.1.exon2;Parent=Dca47515.1 |
