Dca47519.1
Annotation
- 3-exons
- f-1
- sp|B9N7X3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_585605#unknown#0F0P0C
- Repeat List (scaffold579)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47519.1 |
1 |
191 |
204 |
38.23 |
191 |
38 |
4e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N7X3_POPTR |
1 |
161 |
165 |
97.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47519.1 |
6 |
184 |
204 |
25.98 |
179 |
30 |
7e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G18310.2 |
10 |
148 |
167 |
83.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold579 |
Augustus |
mRNA |
79786 |
82804 |
. |
- |
. |
ID=Dca47519.1;Parent=Dca47519 |
| scaffold579 |
Augustus |
exon |
79786 |
80070 |
. |
- |
. |
ID=Dca47519.1.exon1;Parent=Dca47519.1 |
| scaffold579 |
Augus-PASA |
exon |
82364 |
82687 |
. |
- |
. |
ID=Dca47519.1.exon2;Parent=Dca47519.1 |
| scaffold579 |
Augus-PASA |
exon |
82799 |
82804 |
. |
- |
. |
ID=Dca47519.1.exon3;Parent=Dca47519.1 |
