Dca47539.1
Annotation
- 4-exons
- f-1
- sp|A5B6A5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041904#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5796)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47539.1 |
249 |
954 |
1004 |
32.07 |
706 |
42 |
3e-144
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B6A5_VITVI |
120 |
869 |
1633 |
45.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47539.1 |
723 |
1000 |
1004 |
9.16 |
278 |
33 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
482 |
707 |
38.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5796 |
Augustus |
mRNA |
2755 |
8810 |
. |
+ |
. |
ID=Dca47539.1;Parent=Dca47539 |
| scaffold5796 |
Augustus |
exon |
2755 |
2933 |
. |
+ |
. |
ID=Dca47539.1.exon1;Parent=Dca47539.1 |
| scaffold5796 |
Augustus |
exon |
3074 |
5010 |
. |
+ |
. |
ID=Dca47539.1.exon2;Parent=Dca47539.1 |
| scaffold5796 |
Augustus |
exon |
5304 |
6108 |
. |
+ |
. |
ID=Dca47539.1.exon3;Parent=Dca47539.1 |
| scaffold5796 |
Augustus |
exon |
8717 |
8810 |
. |
+ |
. |
ID=Dca47539.1.exon4;Parent=Dca47539.1 |
