Dca47555.1
Annotation
- 4-exons
- f-1
- sp|F6HLQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g05540#GO:0005634;GO:0003677;GO:0003899#2F0P1C
- sp|B9ST46_RICCO#DNA-directed RNA polymerase II, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0248850#GO:0005634;GO:0003677;GO:0003899#2F0P1C
- Repeat List (scaffold58)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47555.1 |
4 |
223 |
224 |
64.73 |
220 |
66 |
3e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HLQ4_VITVI |
8 |
228 |
229 |
96.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47555.1 |
1 |
223 |
224 |
54.46 |
223 |
55 |
4e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G57080.1 |
1 |
221 |
222 |
99.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold58 |
Augustus |
mRNA |
59633 |
62287 |
. |
- |
. |
ID=Dca47555.1;Parent=Dca47555 |
| scaffold58 |
Augustus |
exon |
59633 |
59758 |
. |
- |
. |
ID=Dca47555.1.exon1;Parent=Dca47555.1 |
| scaffold58 |
Augustus |
exon |
60384 |
60497 |
. |
- |
. |
ID=Dca47555.1.exon2;Parent=Dca47555.1 |
| scaffold58 |
Augustus |
exon |
60700 |
60876 |
. |
- |
. |
ID=Dca47555.1.exon3;Parent=Dca47555.1 |
| scaffold58 |
Augustus |
exon |
62030 |
62287 |
. |
- |
. |
ID=Dca47555.1.exon4;Parent=Dca47555.1 |
