Dca47583.1
Annotation
- 3-exons
- f-1
- sp|D7LYI8_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_661741#unknown#0F0P0C
- Os05t0404300-01 Similar to AlNc14C59G4370 protein.
- Repeat List (scaffold58)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47583.1 |
11 |
87 |
87 |
56.32 |
77 |
64 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LYI8_ARALL |
2 |
76 |
76 |
98.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47583.1 |
32 |
87 |
87 |
48.27 |
56 |
75 |
4e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G18920.1 |
22 |
77 |
77 |
72.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold58 |
Augustus |
mRNA |
244718 |
245218 |
. |
+ |
. |
ID=Dca47583.1;Parent=Dca47583 |
| scaffold58 |
Augustus |
exon |
244718 |
244888 |
. |
+ |
. |
ID=Dca47583.1.exon1;Parent=Dca47583.1 |
| scaffold58 |
Augustus |
exon |
244990 |
245035 |
. |
+ |
. |
ID=Dca47583.1.exon2;Parent=Dca47583.1 |
| scaffold58 |
Augustus |
exon |
245172 |
245218 |
. |
+ |
. |
ID=Dca47583.1.exon3;Parent=Dca47583.1 |
