Carnation DB

Dca47584.1

Annotation

9-exons
f-1
sp|B9RU65_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1632970#GO:0005634;GO:0003677;GO:0006351#1F1P1C
AT5G05140.1 | Symbols: | Transcription elongation factor (TFIIS) family protein | chr5:1520353-1522297 FORWARD LENGTH=436
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47584.1	1	456	456	52.85	456	52	4e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9RU65_RICCO	29	470	473	93.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47584.1	1	456	456	41	456	40	4e-71
Target_name	Start	End	Length	Cov(%)
AT5G05140.1	31	436	436	93.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augus-PASA	mRNA	252210	255148	.	+	.	ID=Dca47584.1;Parent=Dca47584
scaffold58	Augus-PASA	exon	252210	252701	.	+	.	ID=Dca47584.1.exon1;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	252942	253010	.	+	.	ID=Dca47584.1.exon2;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	253112	253194	.	+	.	ID=Dca47584.1.exon3;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	253806	253858	.	+	.	ID=Dca47584.1.exon4;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	253977	254092	.	+	.	ID=Dca47584.1.exon5;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	254215	254242	.	+	.	ID=Dca47584.1.exon6;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	254339	254652	.	+	.	ID=Dca47584.1.exon7;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	254740	254830	.	+	.	ID=Dca47584.1.exon8;Parent=Dca47584.1
scaffold58	Augus-PASA	exon	255024	255148	.	+	.	ID=Dca47584.1.exon9;Parent=Dca47584.1