Carnation DB

Dca47591.1

Annotation

6-exons
f-1
sp|B9RPA3_RICCO#Syntaxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0925890#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47591.1	4	359	359	77.99	356	79	2e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9RPA3_RICCO	7	346	346	98.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47591.1	2	359	359	65.18	358	65	9e-120
Target_name	Start	End	Length	Cov(%)
Os01t0179200-01	5	344	345	98.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augus-PASA	mRNA	289985	292155	.	+	.	ID=Dca47591.1;Parent=Dca47591
scaffold58	Augus-PASA	exon	289985	290240	.	+	.	ID=Dca47591.1.exon1;Parent=Dca47591.1
scaffold58	Augustus	exon	290711	290961	.	+	.	ID=Dca47591.1.exon2;Parent=Dca47591.1
scaffold58	Augustus	exon	291046	291221	.	+	.	ID=Dca47591.1.exon3;Parent=Dca47591.1
scaffold58	Augustus	exon	291321	291359	.	+	.	ID=Dca47591.1.exon4;Parent=Dca47591.1
scaffold58	Augustus	exon	291521	291718	.	+	.	ID=Dca47591.1.exon5;Parent=Dca47591.1
scaffold58	Augustus	exon	291996	292155	.	+	.	ID=Dca47591.1.exon6;Parent=Dca47591.1