Carnation DB

Dca47599.1

Annotation

11-exons
f-1
sp|F6HLM9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g05910#GO:0005737;GO:0005524;GO:0003677;GO:0004519;GO:0004326;GO:0016149;GO:0006281#5F1P1C
sp|B9IHV7_POPTR#Folylpolyglutamate synthase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=FPGS4#GO:0005524;GO:0004326;GO:0006730#2F1P0C
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47599.1	11	97	459	11.32	87	60	2e-18
Target_name	Start	End	Length	Cov(%)
sp\|F6HLM9_VITVI	617	703	1717	5.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47599.1	31	97	459	8.06	67	56	1e-12
Target_name	Start	End	Length	Cov(%)
AT3G10160.1	82	148	625	10.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augustus	mRNA	347349	353664	.	+	.	ID=Dca47599.1;Parent=Dca47599
scaffold58	Augustus	exon	347349	347555	.	+	.	ID=Dca47599.1.exon1;Parent=Dca47599.1
scaffold58	Augustus	exon	347761	347826	.	+	.	ID=Dca47599.1.exon2;Parent=Dca47599.1
scaffold58	Augustus	exon	349985	350041	.	+	.	ID=Dca47599.1.exon3;Parent=Dca47599.1
scaffold58	Augustus	exon	350362	350422	.	+	.	ID=Dca47599.1.exon4;Parent=Dca47599.1
scaffold58	Augustus	exon	351069	351115	.	+	.	ID=Dca47599.1.exon5;Parent=Dca47599.1
scaffold58	Augustus	exon	351259	351336	.	+	.	ID=Dca47599.1.exon6;Parent=Dca47599.1
scaffold58	Augustus	exon	351855	351921	.	+	.	ID=Dca47599.1.exon7;Parent=Dca47599.1
scaffold58	Augustus	exon	352371	352702	.	+	.	ID=Dca47599.1.exon8;Parent=Dca47599.1
scaffold58	Augustus	exon	352779	352857	.	+	.	ID=Dca47599.1.exon9;Parent=Dca47599.1
scaffold58	Augustus	exon	353063	353218	.	+	.	ID=Dca47599.1.exon10;Parent=Dca47599.1
scaffold58	Augustus	exon	353435	353664	.	+	.	ID=Dca47599.1.exon11;Parent=Dca47599.1