Dca476.1
Annotation
- 4-exons
- f-1
- sp|D7M4F8_ARALL#Mechanosensitive ion channel domain-containing protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488052#GO:0016020;GO:0055085#0F1P1C
- Repeat List (scaffold1008)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca476.1 |
45 |
290 |
306 |
25.81 |
246 |
32 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7M4F8_ARALL |
475 |
715 |
732 |
32.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca476.1 |
45 |
290 |
306 |
25.49 |
246 |
32 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G12080.1 |
477 |
717 |
734 |
32.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1008 |
Augustus |
mRNA |
62513 |
64870 |
. |
- |
. |
ID=Dca476.1;Parent=Dca476 |
| scaffold1008 |
Augustus |
exon |
62513 |
62759 |
. |
- |
. |
ID=Dca476.1.exon1;Parent=Dca476.1 |
| scaffold1008 |
Augustus |
exon |
62832 |
63040 |
. |
- |
. |
ID=Dca476.1.exon2;Parent=Dca476.1 |
| scaffold1008 |
Augustus |
exon |
64262 |
64555 |
. |
- |
. |
ID=Dca476.1.exon3;Parent=Dca476.1 |
| scaffold1008 |
Augustus |
exon |
64700 |
64870 |
. |
- |
. |
ID=Dca476.1.exon4;Parent=Dca476.1 |
