Carnation DB

Dca47600.1

Annotation

8-exons
f-1
sp|B9IHV8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_734840#unknown#0F0P0C
AT3G08550.1 | Symbols: ELD1, ABI8, KOB1 | elongation defective 1 protein / ELD1 protein | chr3:2596513-2599515 FORWARD LENGTH=533
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47600.1	105	367	367	44.68	263	54	2e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9IHV8_POPTR	160	465	511	59.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47600.1	105	334	367	40.05	230	64	2e-89
Target_name	Start	End	Length	Cov(%)
AT3G08550.1	178	406	533	42.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augustus	mRNA	355264	358522	.	+	.	ID=Dca47600.1;Parent=Dca47600
scaffold58	Augustus	exon	355264	355581	.	+	.	ID=Dca47600.1.exon1;Parent=Dca47600.1
scaffold58	Augustus	exon	356612	356664	.	+	.	ID=Dca47600.1.exon2;Parent=Dca47600.1
scaffold58	Augustus	exon	356741	356849	.	+	.	ID=Dca47600.1.exon3;Parent=Dca47600.1
scaffold58	Augustus	exon	356940	357074	.	+	.	ID=Dca47600.1.exon4;Parent=Dca47600.1
scaffold58	Augustus	exon	357156	357200	.	+	.	ID=Dca47600.1.exon5;Parent=Dca47600.1
scaffold58	Augustus	exon	357377	357567	.	+	.	ID=Dca47600.1.exon6;Parent=Dca47600.1
scaffold58	Augustus	exon	357794	357935	.	+	.	ID=Dca47600.1.exon7;Parent=Dca47600.1
scaffold58	Augustus	exon	358412	358522	.	+	.	ID=Dca47600.1.exon8;Parent=Dca47600.1