Dca47607.1
Annotation
- 4-exons
- f-1
- sp|D7LZF0_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488911#unknown#0F0P0C
- AT5G20090.1 | Symbols: | Uncharacterised protein family (UPF0041) | chr5:6787246-6788000 REVERSE LENGTH=110
- Repeat List (scaffold580)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47607.1 |
3 |
106 |
110 |
84.54 |
104 |
90 |
4e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LZF0_ARALL |
4 |
107 |
110 |
94.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47607.1 |
3 |
108 |
110 |
83.63 |
106 |
87 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G20090.1 |
4 |
109 |
110 |
96.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold580 |
Augus-PASA |
mRNA |
25594 |
27051 |
. |
- |
. |
ID=Dca47607.1;Parent=Dca47607 |
| scaffold580 |
Augus-PASA |
exon |
25594 |
25639 |
. |
- |
. |
ID=Dca47607.1.exon1;Parent=Dca47607.1 |
| scaffold580 |
Augus-PASA |
exon |
26588 |
26723 |
. |
- |
. |
ID=Dca47607.1.exon2;Parent=Dca47607.1 |
| scaffold580 |
Augus-PASA |
exon |
26809 |
26863 |
. |
- |
. |
ID=Dca47607.1.exon3;Parent=Dca47607.1 |
| scaffold580 |
Augustus |
exon |
26956 |
27051 |
. |
- |
. |
ID=Dca47607.1.exon4;Parent=Dca47607.1 |
