Dca47612.1
Annotation
- 2-exons
- f-1
- sp|Q2QWH2_ORYSJ#Transposon protein, putative, Mariner sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g09350#GO:0003677;GO:0004803;GO:0015074;GO:0006313#2F2P0C
- Repeat List (scaffold580)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47612.1 |
2 |
175 |
211 |
33.64 |
174 |
32 |
2e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QWH2_ORYSJ |
113 |
328 |
347 |
62.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47612.1 |
1 |
128 |
211 |
21.32 |
128 |
36 |
3e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0523701-00 |
80 |
197 |
219 |
53.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold580 |
Augustus |
mRNA |
60915 |
62004 |
. |
+ |
. |
ID=Dca47612.1;Parent=Dca47612 |
| scaffold580 |
Augustus |
exon |
60915 |
61277 |
. |
+ |
. |
ID=Dca47612.1.exon1;Parent=Dca47612.1 |
| scaffold580 |
Augustus |
exon |
61732 |
62004 |
. |
+ |
. |
ID=Dca47612.1.exon2;Parent=Dca47612.1 |
