Carnation DB

Dca47625.1

Annotation

5-exons
f-1
sp|A5BA39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041694#GO:0003676;GO:0015074#1F1P0C
AT4G23160.1 | Symbols: CRK8 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | chr4:12129485-12134086 FORWARD LENGTH=1262
Repeat List (scaffold5800)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47625.1	100	240	581	11.87	141	48	5e-24
Target_name	Start	End	Length	Cov(%)
sp\|A5BA39_VITVI	64	206	1099	13.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47625.1	229	532	581	23.92	304	37	7e-65
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	176	551	1262	29.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5800	Augustus	mRNA	40921	43674	.	+	.	ID=Dca47625.1;Parent=Dca47625
scaffold5800	Augustus	exon	40921	41218	.	+	.	ID=Dca47625.1.exon1;Parent=Dca47625.1
scaffold5800	Augustus	exon	41653	42076	.	+	.	ID=Dca47625.1.exon2;Parent=Dca47625.1
scaffold5800	Augustus	exon	42445	42709	.	+	.	ID=Dca47625.1.exon3;Parent=Dca47625.1
scaffold5800	Augustus	exon	42817	43267	.	+	.	ID=Dca47625.1.exon4;Parent=Dca47625.1
scaffold5800	Augustus	exon	43367	43674	.	+	.	ID=Dca47625.1.exon5;Parent=Dca47625.1