Carnation DB

Dca47673.1

Annotation

6-exons
f-1
sp|B9N1T0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827863#GO:0004416;GO:0008270#2F0P0C
sp|G7KDB9_MEDTR#Hydroxyacylglutathione hydrolase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g068440#GO:0004416;GO:0008270#2F0P0C
Repeat List (scaffold5810)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47673.1	5	246	246	77.64	242	79	3e-113
Target_name	Start	End	Length	Cov(%)
sp\|B9N1T0_POPTR	17	258	258	93.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47673.1	5	246	246	72.76	242	74	1e-107
Target_name	Start	End	Length	Cov(%)
AT3G10850.1	17	258	258	93.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5810	Augustus	mRNA	4729	14856	.	-	.	ID=Dca47673.1;Parent=Dca47673
scaffold5810	Augustus	exon	4729	4803	.	-	.	ID=Dca47673.1.exon1;Parent=Dca47673.1
scaffold5810	Augustus	exon	5959	6135	.	-	.	ID=Dca47673.1.exon2;Parent=Dca47673.1
scaffold5810	Augustus	exon	6421	6534	.	-	.	ID=Dca47673.1.exon3;Parent=Dca47673.1
scaffold5810	Augustus	exon	6993	7071	.	-	.	ID=Dca47673.1.exon4;Parent=Dca47673.1
scaffold5810	Augustus	exon	12751	12912	.	-	.	ID=Dca47673.1.exon5;Parent=Dca47673.1
scaffold5810	Augustus	exon	14723	14856	.	-	.	ID=Dca47673.1.exon6;Parent=Dca47673.1