Dca47680.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold5812)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47680.1 |
77 |
429 |
538 |
35.13 |
353 |
50 |
2e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
354 |
728 |
1717 |
21.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47680.1 |
203 |
295 |
538 |
6.13 |
93 |
36 |
3e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5812 |
Augustus |
mRNA |
1878 |
4473 |
. |
- |
. |
ID=Dca47680.1;Parent=Dca47680 |
| scaffold5812 |
Augustus |
exon |
1878 |
3010 |
. |
- |
. |
ID=Dca47680.1.exon1;Parent=Dca47680.1 |
| scaffold5812 |
Augustus |
exon |
3099 |
3369 |
. |
- |
. |
ID=Dca47680.1.exon2;Parent=Dca47680.1 |
| scaffold5812 |
Augustus |
exon |
3612 |
3713 |
. |
- |
. |
ID=Dca47680.1.exon3;Parent=Dca47680.1 |
| scaffold5812 |
Augustus |
exon |
4363 |
4473 |
. |
- |
. |
ID=Dca47680.1.exon4;Parent=Dca47680.1 |
