Carnation DB

Dca47687.1

Annotation

6-exons
f-1
sp|G7L1Q2_MEDTR#Nuclear transcription factor Y subunit B-3#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g100650#GO:0005634;GO:0043565;GO:0006355#1F1P1C
Repeat List (scaffold5814)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47687.1	6	173	173	82.08	168	85	4e-78
Target_name	Start	End	Length	Cov(%)
sp\|G7L1Q2_MEDTR	7	171	171	96.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47687.1	6	171	173	75.72	166	77	3e-67
Target_name	Start	End	Length	Cov(%)
AT2G37060.1	8	171	173	94.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5814	Augus-PASA	mRNA	11108	15764	.	-	.	ID=Dca47687.1;Parent=Dca47687
scaffold5814	Augus-PASA	exon	11108	11146	.	-	.	ID=Dca47687.1.exon1;Parent=Dca47687.1
scaffold5814	Augus-PASA	exon	12525	12575	.	-	.	ID=Dca47687.1.exon2;Parent=Dca47687.1
scaffold5814	Augus-PASA	exon	12722	12802	.	-	.	ID=Dca47687.1.exon3;Parent=Dca47687.1
scaffold5814	Augus-PASA	exon	12900	12905	.	-	.	ID=Dca47687.1.exon4;Parent=Dca47687.1
scaffold5814	Augus-PASA	exon	13055	13184	.	-	.	ID=Dca47687.1.exon5;Parent=Dca47687.1
scaffold5814	Augustus	exon	15550	15764	.	-	.	ID=Dca47687.1.exon6;Parent=Dca47687.1
scaffold5814	Augus-PASA	mRNA	11876	15764	.	-	.	ID=Dca47687.2;Parent=Dca47687
scaffold5814	Augus-PASA	exon	11876	11887	.	-	.	ID=Dca47687.2.exon1;Parent=Dca47687.2
scaffold5814	Augus-PASA	exon	12525	12575	.	-	.	ID=Dca47687.2.exon2;Parent=Dca47687.2
scaffold5814	Augus-PASA	exon	12722	12802	.	-	.	ID=Dca47687.2.exon3;Parent=Dca47687.2
scaffold5814	Augus-PASA	exon	12900	12905	.	-	.	ID=Dca47687.2.exon4;Parent=Dca47687.2
scaffold5814	Augus-PASA	exon	13055	13184	.	-	.	ID=Dca47687.2.exon5;Parent=Dca47687.2
scaffold5814	Augustus	exon	15550	15764	.	-	.	ID=Dca47687.2.exon6;Parent=Dca47687.2